Documents from 2016
Isolation of Pharmaceutical-Degrading Bacteria from Lake Sediments Associated with Wastewater Effluents, Noreen Anne Gallagher
Improving the Performance of ProMOL by Integrating Communal Database Access, Alexander Grier
Investigation of methods for machine learning associations between genetic variations and phenotype, Amanda M. Hartung
Limitation of Invasive Plant Colonization by Native Shrubs During Forested Wetland Restoration, Kaitlyn E. Moranz
Using Geographic Information Systems to Identify Habitat for the Golden-winged Warbler (Vermivora chrysoptera) in Western New York, Jesse Michael Rubenstein
The influences of different socioeconomic scenarios in bioinformatics and biotechnology research: The ethical issues arising from technological advances, Marcia Miki Sato
Documents from 2015
Homology Based Motif Generation, Cameron Baker
Computational identification of conserved haustorial-expressed genes in the grapevine powdery mildew fungus Erysiphe necator, Miriam E. Barnett
Effect of Simulated Canopy Cover on Created Vernal Pools in the Northeastern US, Elizabeth Anne Bruen
Novel nucleosomal particles containing core histones and linker DNA but no histone H1, Hope A. Cole, Feng Cui, Tara L. Burke, Tatiana Nikitina, Vivekananthan Nargarajavel, Naoe Kotomura, Victor B. Zhurkin, and David J. Clark
Assessment of Alignment Algorithms, Variant Discovery and Genotype Calling Strategies in Exome Sequencing Data, Anthony Corbett
Developing an algal biofilm filtration system for the remediation of nutrient pollution in freshwater ponds, Danielle Delp
Data mining NHANES: Utilizing a Genetic Algorithm to Detect Correlation Between Birth Sex Ratio and Epidemiological Factors, Christopher F. Fucile
Repurposing vacant lots for stormwater runoff mitigation in Rochester, New York, Sandra Golberg
Biodiversity and the role of bioturbating invertebrates in nutrient cycling in stormwater ponds, Kerry Lee Kuntz
Trans-species Transcriptomic Comparison of in vitro and in vivo Neural Cells, Peter LoVerso
Modeling Atmospheric Emissions and Calculating Mortality Rates Associated with High Volume Hydraulic Fracturing Transportation, Alyssa Mathews
Seasonal Variation in Chronic Stress and Energetic Condition in Three Species of Migratory Birds, Meghan Oberkircher
Phylogeographic Study of Ctenosaura similis, Hasret Ozturk
Recommended Plantings for Migratory Songbird Habitat Management, Susan B. Smith and Scott R. McWilliams
Investigating Annual Variation in Fruit Quality Using Nutrient Assays and Multidimensional Fluorescence Spectroscopy, Harshita Sood
Analysis of Nicotine in Electronic Cigarettes Using Gas Chromatography-mass Spectrometry, Gloria Wink
Building a Model of Tumorigenesis: A small group activity for a cancer biology/cell biology course, Leslie Kate Wright
Documents from 2014
NuMap: a web platform for prediction of nucleosome rotational and translational positioning at high resolution, Bader Alharbi
Development of SRADE tool and analysis of quality scores of the reads of Next-Generation Sequencing data, Chaitanya Krishna Kotha
Effect of Herbivory on the Growth and Competitive Ability of Reed Canary Grass (Phalaris arundinacea), Lisa A. Kratzer
Characterization of the Ren4 resistance locus through the integration of de novo assembly, expression analysis, and Genotyping-by-Sequencing data, Jacquelyn A. Lillis
Variability in the phenolic content of invasive and non-invasive emergent wetland plants, Melissa M. Maurer
A Composite Interface for Bioinformatics Applications (CIBA), Daniel F. Surdyk III
A Study of Nucleosome Sequence and Relative Position to Gene Transcription Start Sites in Yeast and Human Genomes, Greg Wright
DNA → RNA: What Do Students Think the Arrow Means?, Leslie Kate Wright, J. Nick Fisk, and Dina L. Newman
Documents from 2013
Quantifying Mutational Impacts on Intrinsic DNA Flexibility in Prokaryotic Genomes, Mohammed Alawad
The Impact of Small Pass-through Wetlands and Stormwater Retention Ponds on Dissolved Organic Matter, Michael B. Burkett
Whole-transciptome analysis of [psi+] budding yeast via cDNA microarrays, Jared Carter
An Assessment of worldview-2 imagery for the classification of a mixed deciduous forest, Nahid Carter
Determining a new alignment scoring matrix for disordered proteins, Adam Handen
Genes of Interest in Bronchopulmonary Dysplasia: Studies of Genome-Wide Expression Profiling Data from Lung and Peripheral Blood Samples, Jared A. Mereness
Dual Orientation of the Outer Membrane Lipoprotein P6 of Nontypeable Haemophilus influenzae, Lea V. Michel, Joy Snyder, Rachel Schmidt, Jennnifer Milillo, Kyle Grimaldi, Breanna Kalmeta, M. Nadeem Khan, Sharad Sharma, Leslie Kate Wright, and Michael E. Pichichero
Lessons Learned from the First Year Implementation of a Two-Track, Reformed Introductory Biology Course, Dina L. Newman, Gary R. Skuse, Dawn Carter, F. Harvey Pough, and Leslie Kate Wright
Monitoring the natural processing of organic carbon and phenols in selective wetlands within Monroe County, NY, Muhammad Rubaiyat
Using PCR to Target Misconceptions about Gene Expression, Leslie Kate Wright and Dina L. Newman
Using PCR to Target Misconceptions about Gene Expression, Leslie Kate Wright and Dina L. Newman
Online Reading Informs Classroom Instruction and Promotes Collaborative Learning, Leslie Kate Wright, Sacha Zyto, David R. Karger, and Dina L. Newman
Documents from 2012
Mathematical modeling and screening of ligand binding sites in protein using the tetrahedral motif method and double-centroid representation, Arkanjan Banerjee
The Development of resistance to antibiotics from bacteria exposed to Triclosan and Triclocarban in Lake Ontario, Daniel Boone
Otter spotter: The Creation and evaluation of an educational resource for the association of zoos and aquariums, Rochester Institute of Technology, and the Seneca Park Zoo, Emily Coon-Frisch
Dimethylsulfoxide exposure modulates HL-60 cell rolling interaction, David Gee, Leslie Kate Wright, Jonathan Zimmerman, Kayla Cole, Karen Soule, and Michelle Ubowski
Assembly, annotation, and polymorphic characterization of the Erysiphe necator transcriptome, Jason Myers
Students Fail to Transfer Knowledge of Chromosome Structure to Topics Pertaining to Cell Division, Dina L. Newman, Christina M. Catavero, and Leslie Kate Wright
GRM7 variants associated with age-related hearing loss based on auditory perception, Dina L. Newman, Laurel M. Fisher, Jeffrey Ohmen, Robert Parody, Chin-To Fong, Susan T. Frisina, Frances Mapes, David A. Eddins, Robert D. Frisina, and Rick A. Friedman
Cancer biotherapy resource, Preety Priya
Discovering the role of SERPINE2 in COPD, Swati Shimpi
Environmental science in middle school curricula: A Pilot project in the Dominican Republic, Laura Tejeda
Macroinvertebrates online, Caitlin Treuting
Web-based Interactive Video Vignettes Create a Personalized Active Learning Classroom for Introducing Big Ideas in Introductory Biology, Leslie Kate Wright, Dina L. Newman, Jean A. Cardinale, and Robert Teese
Documents from 2011
Presettlement Forest Composition in the Connecticut Tract of Western New York, Evelyn Brister
Spherical distance metrics applied to protein structure classification, James DeFelice
Error sentinel: A Rule-based spreadsheet program for intelligent data entry, error correction, and curation, Kyle Dewey
Distribution patterns of river otters, Lontra canadensis, within Monroe County, New York, Darren Doherty
RNA-Sequencing analysis from the triceps muscle of normal and myostatin-deficient mice using various tools, Richard Rodrigues
A Study of phylogenetic trees versus networks to objectively identify haplogroups in mitochondrial dna, Melissa Ruda
Electronic medical records concepts and data management, Shruti Sharma
Documents from 2010
Exploratory analysis of pathogen resistance responsible genetic elements in two eudicots from whole genome sequence, Aubrey Bailey
The NHANES III database: Design and a retrospective study to identify associations between vitamin D and hypertension, Brandon J. Marzullo
mtPrimer3: PCR primer design for mtDNA, Psalm Mizuki
A Structured Undergraduate Research Program that Trains and Prepares Students for Post-Graduate Education and Scientific Careers, Dina L. Newman, Leslie Kate Wright, and Hyla C. Sweet
Documents from 2009
The Interaction of peptides with functionalized carbon nanotubes, Poulami Barman
Genetic elements of microbes: a comprehensive and integrated genomic database application, Ashlee Benjamin
Identification of an rsh Gene from a Novosphingobium sp. Necessary for Quorum-Sensing Signal Accumulation, Han Ming Gan, Larry Buckley, Ernő Szegedi, André O. Hudson, and Michael A. Savka
The Potential impact of riparian buffer zones on sediment and phosphorus loading in two Canandaigua Lake subwatersheds, Valerie George
Benthic macroinvertebrate diversity in a shallow estuary: controls on nutrient and algal dynamics, Natalie Ann McLenaghan
Environmental enrichment effects on the activity of a nearctic river otter, Kenneth O. Nelson
Annotation consistency tool: the assessment of JCVI microbial genome annotations, Rhea I. Sanchez
In silico drug design of potential novel anti malarial agents, Vishal Thovarai
Documents from 2008
Detecting relevant changes in high throughput gene expression data, Anusha Aiyalu Kannan
The use of molecular scatology to study river otter (Lontra canadensis) genetics, Barbara McElwee
YZGD pyridoxal phosphatase from P. thiaminolyticus; subcloning, expression, and purification for x-ray crystallography structure determination, Amanda M. Strassner
Differential selective pressures acting on the Influenza A genome: A Comparative study, Melissa Wilbert
Documents from 2007
Analysis of yeast codon usage patterns using the movable ORF collection, Nunut Butarbutar
Developing a habitat suitability model for the spotted turtle using a hybrid-deductive approach, Bryan Correa-Berger
Parallelizing the Cluster Rank Analysis application, Anthony G. Esposito Jr.
EZ-Viz movie, Laura Lynn Grell
Identification of trans-splicing sites in Leishmania major using probabilistic methods, Lukas Habegger
Pedigree tool, Madhumalar Panneerselvam
Conservation of the BRCA1 gene, Matthew Gary Wronkowski
Documents from 2006
The Effectiveness of captive release conservation methods for Spotted Turtles (Clemmys Guttata), Kate Cassim
An Evolutionary Computation Approach to Optimization of Isoelectric Point Prediction in Proteins, Chris Parkin
Preparation for radiological disasters: A Radiation effects epidemiological database, Martha S. Raj
Development of an Automated Template Selection and Alignment Tool for Protein Structure Homology Modeling, David R. Riley
LigEvolver: A Tool for ligand formulation using genetic algorithm, Priyadarsini Soundararajan
Documents from 2005
Isoelectric point prediction from the amino acid sequence of a protein, Matthew Conte
The environmental gradients and plant communities of Bergen Swamp, N.Y., U.S.A., Aaron Hall
